Database of Structural Repeats in Proteins

Protein prenyltransferase alpha subunit - PFTA


Protein prenylation is the posttranslational attachment of either a farnesyl group or a geranylgeranyl group via a thioether linkage (-C-S-C-) to a cysteine at or near the carboxyl terminus of the protein. Farnesyl and geranylgeranyl groups are polyisoprenes, unsaturated hydrocarbons with a multiple of five carbons; the chain is 15 carbons long in the farnesyl moiety and 20 carbons long in the geranylgeranyl moiety. The alpha subunit is thought to participate in a stable complex with the isoprenyl substrate. In the alpha subunits of both types of protein prenyltransferases, seven tetratricopeptide repeats are formed by pairs of helices that are stabilised by conserved intercalating residues.

Link to other db

InterPro:

IPR002088

PROSITE:

PS51147

Pfam:

PF01239

Number of PDB chains with PFTA repeat: 192


1 - 50

PDB

Chain

UniProt

Name

Organism

Repeat annotation

Copies

Score

1N94
A
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
129-163, 166-199, 200-233
3
0.95
2BED
A
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
162-195, 196-233, 234-273, 274-308
4
0.95
3E30
A
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
131-161, 164-197, 198-231, 234-269, 287-323
5
0.95
3DPY
A
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
131-165, 166-198, 199-232, 234-269
4
0.92
1NI1
A
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
112-146, 147-179, 181-215, 216-249
4
0.91
2ZIS
A
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
112-146, 147-179, 181-215, 216-249, 273-307
5
0.91
2ZIR
A
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
112-146, 147-179, 181-215, 216-249, 273-307
5
0.91
4GTM
A
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
112-146, 147-179, 181-215, 216-249, 273-307
5
0.91
1TN8
A
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
112-146, 147-179, 181-215, 216-249
4
0.91
4GTO
A
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
112-146, 147-179, 181-215, 218-252
4
0.91
1TN7
A
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
112-146, 147-179, 181-215, 216-249
4
0.91
3HXF
A
Q08602
Geranylgeranyl transferase type-2 subunit alpha
Rattus norvegicus (Rat)
43-79, 82-122, 124-158
3
0.91
1FPP
A
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
112-146, 147-179, 181-215, 216-249, 273-307
5
0.91
4GTR
A
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
112-146, 147-179, 181-215, 218-252, 273-307
5
0.90
1O1R
A
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
112-146, 147-179, 181-215, 216-249, 273-307
5
0.90
1O1T
A
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
112-146, 147-179, 181-215, 218-252, 273-307
5
0.90
1D8E
A
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
112-146, 147-179, 181-215, 273-307
4
0.90
1O5M
A
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
112-146, 147-179, 181-215, 216-249
4
0.90
4GTQ
A
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
112-146, 147-179, 181-215, 218-252
4
0.90
1S63
A
P49354
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Homo sapiens (Human)
112-146, 147-179, 181-215, 218-252
4
0.89
1KZR
A
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
112-146, 147-179, 181-215, 218-252, 273-307
5
0.89
1O1S
A
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
112-146, 147-179, 181-215, 218-252
4
0.89
1D8D
A
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
112-146, 147-179, 181-215, 218-252, 273-307
5
0.89
1SA5
A
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
112-146, 147-179, 181-215, 218-252, 273-307
5
0.89
1JCR
A
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
112-146, 147-179, 181-215, 216-249, 273-307
5
0.89
3KSQ
A
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
112-146, 147-179, 181-215, 218-252, 273-307
5
0.89
1QBQ
A
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
112-146, 181-215, 218-252, 253-288
4
0.88
3KSL
A
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
112-146, 147-181, 182-215, 218-252, 274-307
5
0.88
1N95
A
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
112-146, 181-215, 218-252, 253-288
4
0.88
3E37
A
P49354
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Homo sapiens (Human)
112-146, 147-179, 181-215, 218-252
4
0.88
1X81
A
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
111-145, 146-179, 181-215, 216-249, 273-307
5
0.88
3E34
A
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
94-129, 131-161, 165-198, 253-292
4
0.88
2H6G
A
P49354
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Homo sapiens (Human)
112-146, 147-179, 181-215, 218-252
4
0.88
1KZP
A
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
112-146, 147-179, 181-215, 218-252, 273-307
5
0.88
1KZO
A
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
112-146, 147-179, 181-215, 216-249, 273-307
5
0.88
1TNO
G
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
112-146, 147-179, 181-215, 218-252
4
0.87
1TNO
A
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
112-146, 147-181, 182-215, 218-252, 253-288
5
0.87
4JBS
B
Q6P179
Endoplasmic reticulum aminopeptidase 2
Homo sapiens (Human)
801-833, 834-865, 866-907
3
0.87
2H6H
A
P49354
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Homo sapiens (Human)
112-146, 147-179, 181-215, 218-252
4
0.87
1S64
K
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
112-146, 147-179, 181-215, 218-252
4
0.87
1S64
E
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
112-146, 147-179, 181-215, 218-252
4
0.87
1TNZ
K
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
112-146, 147-181, 182-215, 218-252
4
0.87
1TNZ
E
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
112-146, 147-181, 182-215, 218-252
4
0.87
1N4R
E
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
112-146, 147-181, 182-215, 218-252
4
0.87
3EU5
A
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
112-146, 147-179, 181-215, 218-252, 253-288, 292-326
6
0.87
1TNY
G
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
112-146, 147-181, 182-215, 218-252
4
0.87
2R2L
A
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
112-146, 147-179, 181-215, 218-252, 274-307
5
0.87
1N4S
A
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
112-146, 147-181, 182-215, 216-249, 253-288
5
0.86
1N4Q
A
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
112-146, 147-181, 182-215, 216-249
4
0.86
1TNO
C
Q04631
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Rattus norvegicus (Rat)
114-146, 147-181, 182-215, 216-249, 253-288
5
0.86