Database of Structural Repeats in Proteins

Protein prenyltransferase beta subunit - PFTB


Protein prenyltransferase (PTase) domain, beta subunit (alpha 6 - alpha 6 barrel fold). The protein prenyltransferase family of lipid-modifying enzymes includes protein farnesyltransferase (FTase) and geranylgeranyltransferase types I and II (GGTase-I and GGTase-II). They catalyze the carboxyl-terminal lipidation of Ras, Rab, and several other cellular signal transduction proteins, facilitating membrane associations and specific protein-protein interactions. Prenyltransferases employ a Zn2+ ion to alkylate a thiol group catalyzing the formation of thioether linkages between the C1 atom of farnesyl (15-carbon by FTase) or geranylgeranyl (20-carbon by GGTase-I, II) isoprenoid lipids and cysteine residues at or near the C-terminus of protein acceptors. FTase and GGTase-I prenylate the cysteine in the terminal sequence, CAAX; and GGTase-II prenylates both cysteines in the CC (or CXC) terminal sequence.

Number of PDB chains with PFTB repeat: 152


1 - 50

PDB

Chain

UniProt

Name

Organism

Repeat annotation

Copies

Score

1O1T
B
Q02293
Protein farnesyltransferase subunit beta
Rattus norvegicus (Rat)
174-215, 222-263, 270-318
3
0.94
4GTP
B
Q02293
Protein farnesyltransferase subunit beta
Rattus norvegicus (Rat)
174-215, 222-263, 270-305
3
0.94
1D8D
B
Q02293
Protein farnesyltransferase subunit beta
Rattus norvegicus (Rat)
174-215, 222-263, 270-305
3
0.94
4GTQ
B
Q02293
Protein farnesyltransferase subunit beta
Rattus norvegicus (Rat)
174-215, 222-263, 270-317
3
0.94
3KSL
B
Q02293
Protein farnesyltransferase subunit beta
Rattus norvegicus (Rat)
174-215, 222-263, 270-318
3
0.94
1O1S
B
Q02293
Protein farnesyltransferase subunit beta
Rattus norvegicus (Rat)
174-215, 222-263, 270-305
3
0.94
1JCR
B
Q02293
Protein farnesyltransferase subunit beta
Rattus norvegicus (Rat)
174-215, 222-263, 270-305
3
0.94
4GTR
B
Q02293
Protein farnesyltransferase subunit beta
Rattus norvegicus (Rat)
174-215, 222-263, 270-305
3
0.94
1KZR
B
Q02293
Protein farnesyltransferase subunit beta
Rattus norvegicus (Rat)
174-215, 222-263, 270-305
3
0.94
4GTM
B
Q02293
Protein farnesyltransferase subunit beta
Rattus norvegicus (Rat)
174-215, 222-263, 270-318
3
0.94
1FPP
B
Q02293
Protein farnesyltransferase subunit beta
Rattus norvegicus (Rat)
174-215, 222-263, 270-317
3
0.94
1QBQ
B
Q02293
Protein farnesyltransferase subunit beta
Rattus norvegicus (Rat)
174-215, 222-263, 270-318
3
0.94
2ZIS
B
Q02293
Protein farnesyltransferase subunit beta
Rattus norvegicus (Rat)
174-215, 222-263, 270-305
3
0.94
3PZ1
B
P53612
Geranylgeranyl transferase type-2 subunit beta
Mus musculus (Mouse)
116-157, 164-205, 211-252
3
0.93
3KSQ
B
Q02293
Protein farnesyltransferase subunit beta
Rattus norvegicus (Rat)
174-215, 221-262, 270-318
3
0.93
3E34
B
Q02293
Protein farnesyltransferase subunit beta
Rattus norvegicus (Rat)
174-215, 221-262, 270-305
3
0.93
1X81
B
Q02293
Protein farnesyltransferase subunit beta
Rattus norvegicus (Rat)
174-215, 222-263, 270-318
3
0.93
4L9P
B
Q4WPS9
Protein farnesyltransferase subunit beta {ECO:0000256|RuleBase:RU365056}
Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC
170-215, 224-265, 285-326, 338-384
4
0.93
3E30
B
Q02293
Protein farnesyltransferase subunit beta
Rattus norvegicus (Rat)
174-215, 222-263, 270-305, 332-374
4
0.93
3HXE
B
Q08603
Geranylgeranyl transferase type-2 subunit beta
Rattus norvegicus (Rat)
116-157, 164-205, 211-252
3
0.93
1N95
B
Q02293
Protein farnesyltransferase subunit beta
Rattus norvegicus (Rat)
174-215, 222-263, 270-318
3
0.93
1N9A
B
Q02293
Protein farnesyltransferase subunit beta
Rattus norvegicus (Rat)
174-215, 222-263, 270-318
3
0.93
2F0Y
B
P49356
Protein farnesyltransferase subunit beta
Homo sapiens (Human)
174-215, 222-263, 270-305
3
0.93
1LD8
B
P49356
Protein farnesyltransferase subunit beta
Homo sapiens (Human)
674-715, 721-762, 770-805
3
0.93
1FT1
B
Q02293
Protein farnesyltransferase subunit beta
Rattus norvegicus (Rat)
174-215, 222-263, 270-318, 332-374
4
0.93
1S63
B
P49356
Protein farnesyltransferase subunit beta
Homo sapiens (Human)
174-215, 221-262, 270-305
3
0.93
1N4S
L
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
144-192, 193-240, 242-290, 291-339
4
0.92
1TNB
H
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
144-192, 193-240, 242-290, 291-339
4
0.92
1S64
D
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
144-192, 193-240, 242-290, 291-339
4
0.92
1TNY
D
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
144-192, 193-240, 242-290, 291-339
4
0.92
1O1R
B
Q02293
Protein farnesyltransferase subunit beta
Rattus norvegicus (Rat)
174-215, 221-262, 270-305
3
0.92
1O5M
B
Q02293
Protein farnesyltransferase subunit beta
Rattus norvegicus (Rat)
174-215, 221-262, 270-305
3
0.92
1TNB
D
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
144-192, 193-240, 242-290, 291-339
4
0.92
1TNY
L
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
144-192, 193-240, 242-290, 291-339
4
0.92
1TNY
J
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
144-192, 193-240, 242-290, 291-339
4
0.92
1JCS
B
Q02293
Protein farnesyltransferase subunit beta
Rattus norvegicus (Rat)
174-215, 221-262, 270-305
3
0.92
1KZO
B
Q02293
Protein farnesyltransferase subunit beta
Rattus norvegicus (Rat)
174-215, 221-262, 270-305
3
0.92
1KZP
B
Q02293
Protein farnesyltransferase subunit beta
Rattus norvegicus (Rat)
174-215, 221-262, 270-318
3
0.92
1LD7
B
P49356
Protein farnesyltransferase subunit beta
Homo sapiens (Human)
674-715, 721-762, 770-805
3
0.92
1TNY
H
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
144-192, 193-240, 242-290, 291-339
4
0.92
1TNO
F
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
144-192, 193-240, 242-290, 291-339
4
0.92
1TNO
B
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
144-192, 193-240, 242-290, 291-339
4
0.92
1TN6
B
P49356
Protein farnesyltransferase subunit beta
Homo sapiens (Human)
674-715, 721-762, 770-805
3
0.92
1N4P
H
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
143-191, 192-240, 242-290, 291-339
4
0.92
1TNY
B
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
144-192, 193-240, 242-290, 291-339
4
0.92
1N4P
L
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
143-191, 192-240, 242-290, 291-339
4
0.92
1N4Q
D
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
144-192, 193-240, 242-290, 291-339
4
0.92
1TNY
F
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
144-192, 193-240, 242-290, 291-339
4
0.92
1N4Q
L
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
144-192, 193-240, 242-290, 291-339
4
0.92
1TN7
B
Q02293
Protein farnesyltransferase subunit beta
Rattus norvegicus (Rat)
674-715, 722-763, 770-805, 832-874
4
0.92