Database of Structural Repeats in Proteins

Protein prenyltransferase beta subunit - PFTB


Protein prenyltransferase (PTase) domain, beta subunit (alpha 6 - alpha 6 barrel fold). The protein prenyltransferase family of lipid-modifying enzymes includes protein farnesyltransferase (FTase) and geranylgeranyltransferase types I and II (GGTase-I and GGTase-II). They catalyze the carboxyl-terminal lipidation of Ras, Rab, and several other cellular signal transduction proteins, facilitating membrane associations and specific protein-protein interactions. Prenyltransferases employ a Zn2+ ion to alkylate a thiol group catalyzing the formation of thioether linkages between the C1 atom of farnesyl (15-carbon by FTase) or geranylgeranyl (20-carbon by GGTase-I, II) isoprenoid lipids and cysteine residues at or near the C-terminus of protein acceptors. FTase and GGTase-I prenylate the cysteine in the terminal sequence, CAAX; and GGTase-II prenylates both cysteines in the CC (or CXC) terminal sequence.

Number of PDB chains with PFTB repeat: 152


1 - 50

PDB

Chain

UniProt

Name

Organism

Repeat annotation

Copies

Score

6BZX
A
-
-
-
10-41, 42-74, 75-105, 106-136, 137-167, 168-198, 199-231
7
0.78
1FTI
B
Q02293
Protein farnesyltransferase subunit beta
Rattus norvegicus (Rat)
120-170, 173-221, 222-269, 270-318, 332-380
5
0.88
3PZ2
B
P53612
Geranylgeranyl transferase type-2 subunit beta
Mus musculus (Mouse)
68-109, 116-157, 164-205, 211-252, 260-303
5
0.89
2FTI
B
Q02293
Protein farnesyltransferase subunit beta
Rattus norvegicus (Rat)
120-170, 173-221, 222-269, 270-318, 332-380
5
0.88
3HXD
B
Q08603
Geranylgeranyl transferase type-2 subunit beta
Rattus norvegicus (Rat)
67-115, 116-163, 164-211, 212-258, 260-308
5
0.90
3DSS
B
Q08603
Geranylgeranyl transferase type-2 subunit beta
Rattus norvegicus (Rat)
67-115, 116-163, 164-211, 212-259, 260-308
5
0.91
3HXC
B
Q08603
Geranylgeranyl transferase type-2 subunit beta
Rattus norvegicus (Rat)
67-115, 116-163, 164-211, 212-252, 260-308
5
0.85
4GTS
B
Q08603
Geranylgeranyl transferase type-2 subunit beta
Rattus norvegicus (Rat)
68-109, 116-157, 163-204, 212-253, 260-303
5
0.90
1NL4
B
Q02293
Protein farnesyltransferase subunit beta
Rattus norvegicus (Rat)
120-164, 173-215, 219-262, 268-318, 331-374
5
0.87
2H6G
B
P49356
Protein farnesyltransferase subunit beta
Homo sapiens (Human)
620-664, 673-715, 719-762, 768-818, 831-874
5
0.88
1FT2
B
Q02293
Protein farnesyltransferase subunit beta
Rattus norvegicus (Rat)
120-170, 173-221, 222-269, 270-318, 332-380
5
0.88
1D8E
B
Q02293
Protein farnesyltransferase subunit beta
Rattus norvegicus (Rat)
120-171, 173-221, 222-269, 270-318, 332-380
5
0.91
1DCE
D
Q08603
Geranylgeranyl transferase type-2 subunit beta
Rattus norvegicus (Rat)
67-115, 116-163, 164-211, 212-259, 260-308
5
0.91
1JCQ
B
P49356
Protein farnesyltransferase subunit beta
Homo sapiens (Human)
120-171, 173-221, 222-269, 270-318, 332-380
5
0.90
3FTI
B
Q02293
Protein farnesyltransferase subunit beta
Rattus norvegicus (Rat)
120-170, 173-221, 222-269, 270-318, 332-380
5
0.88
1NI1
B
Q02293
Protein farnesyltransferase subunit beta
Rattus norvegicus (Rat)
120-170, 173-221, 222-269, 270-318
4
0.91
1S64
B
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
144-192, 193-240, 242-290, 291-339
4
0.92
1TNO
H
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
144-192, 193-240, 242-290, 291-339
4
0.92
1TNB
B
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
144-192, 193-240, 242-290, 291-339
4
0.92
1TNB
J
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
144-192, 193-240, 242-290, 291-339
4
0.92
1N94
B
Q02293
Protein farnesyltransferase subunit beta
Rattus norvegicus (Rat)
172-214, 221-263, 268-305, 332-374
4
0.90
1TNO
L
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
155-191, 192-240, 241-289, 291-339
4
0.88
1N4S
L
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
144-192, 193-240, 242-290, 291-339
4
0.92
1TNO
F
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
144-192, 193-240, 242-290, 291-339
4
0.92
1TNB
D
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
144-192, 193-240, 242-290, 291-339
4
0.92
1S64
F
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
144-192, 193-240, 242-290, 291-339
4
0.92
1S64
H
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
144-192, 193-240, 242-290, 291-339
4
0.92
1TNO
D
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
144-192, 193-240, 242-290, 291-339
4
0.91
1S64
D
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
144-192, 193-240, 242-290, 291-339
4
0.92
1TNU
D
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
144-192, 193-240, 242-290, 291-339
4
0.91
1N4P
H
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
143-191, 192-240, 242-290, 291-339
4
0.92
1SA5
B
Q02293
Protein farnesyltransferase subunit beta
Rattus norvegicus (Rat)
120-171, 221-269, 270-318, 332-380
4
0.90
1TNO
B
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
144-192, 193-240, 242-290, 291-339
4
0.92
1FT1
B
Q02293
Protein farnesyltransferase subunit beta
Rattus norvegicus (Rat)
174-215, 222-263, 270-318, 332-374
4
0.93
1TNB
H
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
144-192, 193-240, 242-290, 291-339
4
0.92
1TNO
J
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
144-192, 193-240, 242-290, 291-339
4
0.92
1TNU
B
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
144-192, 193-240, 242-290, 291-339
4
0.91
1S64
J
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
144-192, 193-240, 242-290, 291-339
4
0.92
1LTX
B
Q08603
Geranylgeranyl transferase type-2 subunit beta
Rattus norvegicus (Rat)
67-115, 116-163, 164-211, 212-258
4
0.91
1TNB
F
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
144-192, 193-240, 242-290, 291-339
4
0.92
1TN7
B
Q02293
Protein farnesyltransferase subunit beta
Rattus norvegicus (Rat)
674-715, 722-763, 770-805, 832-874
4
0.92
1N4R
F
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
142-185, 191-233, 241-283, 291-333
4
0.89
1N4P
L
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
143-191, 192-240, 242-290, 291-339
4
0.92
1N4Q
B
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
144-192, 193-240, 242-290, 291-339
4
0.91
1N4Q
D
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
144-192, 193-240, 242-290, 291-339
4
0.92
1N4Q
F
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
144-192, 193-240, 242-290, 291-339
4
0.91
1N4Q
H
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
144-192, 193-240, 242-290, 291-339
4
0.91
1N4Q
J
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
144-192, 193-240, 242-290, 291-339
4
0.91
1N4Q
L
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
144-192, 193-240, 242-290, 291-339
4
0.92
1N4R
B
P53610
Geranylgeranyl transferase type-1 subunit beta
Rattus norvegicus (Rat)
142-185, 191-233, 241-283, 291-333
4
0.89