Database of Structural Repeats in Proteins



PRC_EH/HE_TIMBarrel_29C


The Denovo Protein Repeat Cluster comprises of Helix-Strand/Strand-Helix repeats of around 29 amino acid residues. The repeating units are arranged to form a TIM Barrel fold.

Number of PDB chains with PRC_EH/HE_TIMBarrel_29C repeat: 63
1 - 50

PDB

Chain

UniProt

Name

Organism

Repeat annotation

Copies

Score
4I7U
B
F0L8Z6
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418}
Agrobacterium sp
96-125, 126-154, 155-181
3
0.95
4XKY
A
Q8A3Z0
Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 1058
56-84, 113-141, 143-169, 170-192
4
0.94
4I7U
D
F0L8Z6
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418}
Agrobacterium sp
96-125, 126-154, 155-181
3
0.94
4LY8
D
Q9PPB4
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}
Campylobacter jejuni subsp
100-128, 129-158, 159-184
3
0.94
3U8G
B
D0CFC3
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418}
Acinetobacter baumannii (strain ATCC 19606 / DSM 30007 / CIP 70
53-81, 82-108, 110-139, 140-166, 167-187
5
0.93
5C54
G
Q8NMD2
Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 /
115-140, 145-171, 172-200
3
0.93
3SI9
C
Q6G468
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}
Bartonella henselae (strain ATCC 49882 / DSM 28221 / Houston 1)
100-129, 130-158, 159-186
3
0.93
3NEV
A
P75682
Putative 2-dehydro-3-deoxy-D-gluconate aldolase YagE {ECO:0000305}
Escherichia coli (strain K12)
92-122, 123-153, 154-179, 180-205
4
0.93
3I7S
B
P0A6L2
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}
Escherichia coli (strain K12)
52-80, 81-107, 109-138, 139-167, 168-187
5
0.93
4MLJ
D
Q9PPB4
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}
Campylobacter jejuni subsp
100-128, 129-158, 161-185
3
0.93
5J5D
A
P9WP25
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}
Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
63-91, 92-117, 120-149, 150-176, 177-195
5
0.92
3TAK
A
D0CFC3
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418}
Acinetobacter baumannii (strain ATCC 19606 / DSM 30007 / CIP 70
53-81, 82-109, 111-139, 141-166, 167-187
5
0.92
6NVA
A
A0A066Q637
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418}
Escherichia coli
52-80, 81-106, 109-138, 139-166, 167-187
5
0.92
6NVA
H
A0A066Q637
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418}
Escherichia coli
53-81, 82-107, 110-138, 139-167, 168-187
5
0.92
4O0K
A
C0RKH4
Brucella melitensis biotype 2 (strain ATCC 23457)
113-141, 142-168, 169-194
3
0.92
4WOZ
A
D5Q364
N-acetylneuraminate lyase {ECO:0000256|HAMAP-Rule:MF_01237}
Clostridioides difficile NAP08
110-139, 142-167, 171-194
3
0.92
1XXX
E
P9WP25
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}
Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
63-91, 92-118, 121-149, 150-176, 177-195, 196-213
6
0.92
1DHP
A
P0A6L2
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}
Escherichia coli (strain K12)
53-81, 82-109, 111-139, 141-167, 168-197
5
0.92
1S5W
A
P0A6L2
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}
Escherichia coli (strain K12)
53-81, 82-109, 111-139, 141-167, 168-197
5
0.91
4MLJ
B
Q9PPB4
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}
Campylobacter jejuni subsp
100-128, 129-158, 161-185
3
0.91
4ONV
A
P75682
Putative 2-dehydro-3-deoxy-D-gluconate aldolase YagE {ECO:0000305}
Escherichia coli (strain K12)
92-122, 124-154, 155-179, 180-205
4
0.91
5T25
A
P0A6L2
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}
Escherichia coli (strain K12)
52-80, 81-106, 109-138, 139-166, 167-187
5
0.91
5T26
B
P0A6L2
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}
Escherichia coli (strain K12)
52-80, 81-106, 109-135, 136-166, 167-187
5
0.91
4ONV
B
P75682
Putative 2-dehydro-3-deoxy-D-gluconate aldolase YagE {ECO:0000305}
Escherichia coli (strain K12)
92-122, 124-154, 155-179, 180-205
4
0.91
4ONV
C
P75682
Putative 2-dehydro-3-deoxy-D-gluconate aldolase YagE {ECO:0000305}
Escherichia coli (strain K12)
92-122, 124-154, 155-179, 180-205
4
0.91
4ONV
D
P75682
Putative 2-dehydro-3-deoxy-D-gluconate aldolase YagE {ECO:0000305}
Escherichia coli (strain K12)
92-122, 124-154, 155-179, 180-203
4
0.91
4WOZ
F
D5Q364
N-acetylneuraminate lyase {ECO:0000256|HAMAP-Rule:MF_01237}
Clostridioides difficile NAP08
66-94, 95-120, 123-151, 152-180, 181-203
5
0.91
3PUE
A
D0CFC3
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418}
Acinetobacter baumannii (strain ATCC 19606 / DSM 30007 / CIP 70
53-81, 82-108, 111-139, 141-166, 167-187
5
0.91
6NVA
C
A0A066Q637
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418}
Escherichia coli
52-80, 81-106, 109-135, 136-166, 167-187
5
0.91
6NVA
E
A0A066Q637
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418}
Escherichia coli
52-80, 81-106, 109-138, 139-166, 167-187
5
0.91
3DU0
B
P0A6L2
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}
Escherichia coli (strain K12)
52-80, 81-106, 109-138, 139-166, 167-187
5
0.91
1YXC
B
P0A6L2
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}
Escherichia coli (strain K12)
53-81, 82-109, 111-139, 141-167, 168-197
5
0.91
2A6N
B
P0A6L2
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}
Escherichia coli (strain K12)
53-81, 82-109, 111-139, 141-167, 168-197
5
0.91
3DEN
A
P0A6L2
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}
Escherichia coli (strain K12)
52-80, 81-106, 109-138, 139-166, 167-187
5
0.91
3C0J
A
P0A6L2
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}
Escherichia coli (strain K12)
53-79, 80-106, 110-135, 139-165, 166-187
5
0.91
5T26
A
P0A6L2
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}
Escherichia coli (strain K12)
52-80, 81-106, 109-135, 136-166, 167-187
5
0.90
4AHO
C
Q2G160
N-acetylneuraminate lyase {ECO:0000255|HAMAP-Rule:MF_01237, ECO:0000303|PubMed:23418011}
Staphylococcus aureus (strain NCTC 8325)
56-83, 84-109, 112-137, 166-190
4
0.90
1XXX
F
P9WP25
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}
Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
63-91, 92-120, 122-152, 153-176, 177-205
5
0.90
1XXX
G
P9WP25
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}
Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
63-91, 92-119, 122-151, 152-176, 177-205
5
0.90
1XXX
H
P9WP25
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}
Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
63-91, 92-119, 122-151, 152-176, 177-205
5
0.90
2EHH
E
O67216
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}
Aquifex aeolicus (strain VF5)
52-80, 81-107, 110-138, 141-166, 167-187
5
0.90
6NVA
F
A0A066Q637
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418}
Escherichia coli
52-80, 81-106, 109-135, 136-166, 167-187
5
0.90
3DU0
A
P0A6L2
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}
Escherichia coli (strain K12)
52-80, 81-106, 109-135, 136-166, 167-187
5
0.90
3PS7
B
Q9I4W3
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}
Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / J
52-79, 80-103, 108-135, 138-165, 166-189
5
0.90
3PUO
A
Q9I4W3
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}
Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / J
51-78, 79-104, 107-134, 136-164, 165-187
5
0.90
3SI9
D
Q6G468
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}
Bartonella henselae (strain ATCC 49882 / DSM 28221 / Houston 1)
57-85, 86-112, 115-143, 146-171, 172-192
5
0.90
2OJP
B
P0A6L2
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}
Escherichia coli (strain K12)
53-81, 82-110, 111-139, 140-167, 168-187
5
0.89
6DAQ
B
Q6H2K0
Mycolicibacterium vanbaalenii (Mycobacterium vanbaalenii)
71-99, 100-125, 129-156, 157-185, 186-216
5
0.89
4M19
C
Q9PPB4
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}
Campylobacter jejuni subsp
86-107, 114-139, 144-170
3
0.89
5F1U
C
Q9PPB4
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}
Campylobacter jejuni subsp
56-85, 86-112, 116-144, 145-171
4
0.89