Protein Repeat Identification by Graph Spectral Analysis
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Datasets: 1. PRIGSA2 prediction on benchmark dataset of solenoid and non-solenoid proteins Download 2. PRIGSA2 prediction on non-redundant dataset of 375 repeat proteins obtained from UniProt database. Download 3. PRIGSA2 prediction on complete Protein Data Bank. Download 4. Structural alignment of repeat copies within a protein: The file gives details of pairwise structural alignment between all repeat copies within a protein reported in UniProt database. The results of the alignment are used to define the structural alignment threshold of PRIGSA2 algorithm. Download |
Contact: Broto Chakrabarty and Dr. Nita Parekh,
Centre for Computational Natural Sciences and Bioinformatics, International Institute of Information Technology-Hyderabad
email: broto.chakrabarty@research.iiit.ac.in, nita@iiit.ac.in